Now showing items 1-5 of 5

  • Siddiqui, Huma; Lagesen, Karin; Nederbragt, Alexander J; Jeansson, Stig L; Jakobsen, Kjetill S (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2012)
    Background Interstitial Cystitis (IC) is a chronic inflammatory condition of the bladder with unknown etiology. The aim of this study was to characterize the microbial community present in the urine from ...
  • Bohlin, Jon; Snipen, Lars; Hardy, Simon P; Kristoffersen, Anja B; Lagesen, Karin; Dønsvik, Torunn; Skjerve, Eystein; Ussery, David W (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2010)
    Background Bacterial genomes possess varying GC content (total guanines (Gs) and cytosines (Cs) per total of the four bases within the genome) but within a given genome, GC content can vary locally along ...
  • Siddiqui, Huma; Nederbragt, Alexander J; Lagesen, Karin; Jeansson, Stig L; Jakobsen, Kjetill S (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2011)
    Background Urine within the urinary tract is commonly regarded as "sterile" in cultivation terms. Here, we present a comprehensive in-depth study of bacterial 16S rDNA sequences associated with urine from ...
  • de Muinck, Eric J; Lagesen, Karin; Afset, Jan E; Didelot, Xavier; Rønningen, Kjersti S; Rudi, Knut; Stenseth, Nils C; Trosvik, Pål (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2013)
    Background Despite being one of the most intensely studied model organisms, many questions still remain about the evolutionary biology and ecology of Escherichia coli. An important step toward achieving a ...
  • Khelik, Ksenia; Lagesen, Karin; Sandve, Geir K; Rognes, Torbjørn; Nederbragt, Alexander J (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2017)
    Background Comparing sets of sequences is a situation frequently encountered in bioinformatics, examples being comparing an assembly to a reference genome, or two genomes to each other. The purpose of the ...