Browsing Institutt for informatikk by Author "Rounge, Trine B."

Now showing items 1-3 of 3

  • HoCoRT: host contamination removal tool 
    Rumbavicius, Ignas; Rounge, Trine B.; Rognes, Torbjørn (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2023)
    Background Shotgun metagenome sequencing data obtained from a host environment will usually be contaminated with sequences from the host organism. Host sequences should be removed before further analysis ...
  • Profiling small RNAs in fecal immunochemical tests: is it possible? 
    Birkeland, Einar; Ferrero, Giulio; Pardini, Barbara; Umu, Sinan U.; Tarallo, Sonia; Bulfamante, Sara; Hoff, Geir; Senore, Carlo; Rounge, Trine B.; Naccarati, Alessio (Journal article / Tidsskriftartikkel / PublishedVersion, 2023)
    Fecal microRNAs represent promising molecules with potential clinical interest as non-invasive diagnostic and prognostic biomarkers. Colorectal cancer (CRC) screening based on the fecal immunochemical test (FIT) is an ...
  • The CRCbiome study: a large prospective cohort study examining the role of lifestyle and the gut microbiome in colorectal cancer screening participants 
    Kværner, Ane S.; Birkeland, Einar; Bucher-Johannessen, Cecilie; Vinberg, Elina; Nordby, Jan I.; Kangas, Harri; Bemanian, Vahid; Ellonen, Pekka; Botteri, Edoardo; Natvig, Erik; Rognes, Torbjørn; Hovig, Eivind; Lyle, Robert; Ambur, Ole H.; de Vos, Willem M.; Bultman, Scott; Hjartåker, Anette; Landberg, Rikard; Song, Mingyang; Blix, Hege S.; Ursin, Giske; Randel, Kristin R.; de Lange, Thomas; Hoff, Geir; Holme, Øyvind; Berstad, Paula; Rounge, Trine B. (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2021)
    Background Colorectal cancer (CRC) screening reduces CRC incidence and mortality. However, current screening methods are either hampered by invasiveness or suboptimal performance, limiting their effectiveness ...